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Over the past 25 years, autoimmune diagnostics has gone through an evolutionary period, which seems not yet ended, as clinical and basic knowledge in the field of autoimmunity is still growing.
From year to year, important achievements in pathophysiology, development of new diagnostic technologies and advances in therapy of autoimmune diseases (AIDs) have been steadily added.
We could now wonder if such events could have been foreseen at the beginning of the era of modern autoimmune diagnostics.
The answer to this question lies in the expected changes in clinical immunology laboratories as dictated in the early 1990s.
The rationale in favor of this approach lies in the advantage of placing as many assays on a single analyzer, rather than maintaining two or more analyzers, because each instrument requires separate quality control (QC), preventive maintenance, record keeping, etc. TLA combines a large variety of processes, including accessioning and sorting specimens, decapping tubes, centrifugation, aliquoting, delivery to analyzers, recapping tubes, and storage and archiving of samples.
Aside from these huge improvements, organizational changes have also occurred which brought about a more modern vision of the autoimmune laboratory.
automated multiplex IMAs and autoantibody profiling. Recently, indirect immunofluorescence (IIF) automation for reading and interpretation of ANA and other autoantibodies was developed, supported by the American College of Rheumatology recommendation that IIF is the reference method for anti-nuclear-cytoplasmic antibodies (NCA or ANA) [).
These systems allow for automated classification of samples, with a high efficiency in discriminating between positive and negative ANA and an acceptable correlation with manual microscope reading [These features allow a different approach to the diagnostic strategy for the detection of NCA-ANA, ANCA, and DNAAb, based on a two-step algorithm: the first stage, the screening of positive/negative and positive samples selection; the second stage, identification of specific antibodies for confirmation of screening results and classification of autoimmune diseases [This flow of information in autoimmune diagnostics has long been conducted with the strategy of reflective testing.
The third generation of laboratory systems now encompasses most of the analytical steps of the laboratory workflow, enabling the clinical pathologists (autoimmunologists in this case) to focus on ‘value-added’ work, such as result validation and production of narrative reports for clinical interpretation .
The two key concepts of third generation systems are ‘consolidation’ (i.e., combining different analytical technologies or strategies on one instrument or on one group of connected instruments) and ‘integration’ (linking analytical instruments or group of instruments with pre- and post-analytical devices).
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Most, if not all, the obstacles to automation as defined by Tomar as much as 15 years ago  are now completely removed.